Curriculum Vitæ

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Index

Actual Position

2023-today
DIMEC at University of Bologna
University of Bologna, Italy
Interests/Research line
  • Use of complex systems and machine learning tools to detect antibiotic resitance
  • Mesoscopic structures and their influence on the dynamical system
  • Applied data analysis for disease control
  • Analysis of information dynamics in social networks and medical systems

Professional Experience

2021 - 2022
Université de Paris, (CEPED and IRD)
Paris, France
Postdoctoral researcher
2015 - 2020
Université Catholique de Louvain (ICTEAM)
Louvain la Neuve, Belgium
MOVE IN Louvain Research Fellow
2011 - 2015
ISI Fundation
Torino, Italy
Junior researcher
2006 - 2011
Bifi Institute
Zaragoza, Spain
PhD

Fellowships and Projects

2021 - 2022
TRACTRUST (ANR-20-COVI-0102)
2017 - 2021
Innoviris Iris-TB (D1.31402.007-F)
2015 - 2017
MOVE-IN Louvain Fellowship (with support of Marie Curie Actions)

Membership

2018 - today
SICC - Italian Society for Chaos and Complexity
2015 - today
Network Science Society
Member
2014 - today
Complex Systems Society
Member
2013 - today
Frontiers in Quantum Computing
Review Editor

Program Committees

1 Dec 2021
Complex Networks 2021
Madrid, Spain
1 Dec 2020
Complex Networks 2020
Madrid, Spain
10 Dec 2019
Complex Networks 2019
Lisbon, Portugal
22 Feb 2019
BeNet 2019
Hasselt, Belgium
11 Dec 2018
Complex Networks 2018
Cambridge, UK
29 Nov 2017
Complex Networks 2017
Lyon, France
30 Nov 2016
Complex Networks 2016
Milan, Italy

Organizing Committees

August 2019
Network Reconstruction Science-athon
Beaumont, Belgium
Coorganized with Alexandre Bovet, Benjamin Chiem, Leo Gutierrez, Alexey Medvedev, Leto Peel, Mridul Seth
15 Dec 2016
Belgian Network Research Meeting (BeNet) 2016
Louvain-la-Neuve, Belgium
Coorganized with Sophie Béreau, Jean-Charles Delvenne, Yerali Gandica, Leo Gutierrez, Leto Peel, Michael Schaub
21 Sep 2016
Conference on Complex Systems 2016 workshop on Coarse-graining Complex Systems
CCS2016, Amsterdam, Netherlands
Coorganized with Leto Peel, Renaud Lambiotte, Michael Schaub
2 Jun 2014
Quantum Frontiers for Network Science
NetSci 2014, Berkeley, California
Coorganized with Filippo Radicchi and Zoltan Zimborás

Reviewer

APS (PRA, PRB, PRE, PRX)
Advances in Complex Systems
Applied Network Science
Journal of Complex Networks
Journal of Statistical Mechanics
Natural Computing
PLOS ONE
Science Advances
Scientific Reports

Teaching

2023-2024
DAT301 Social Network Analysis
Teacher Assistant
University Mohammed VI Polytechnic
2015-2020
LINMA2111 Algorithms and Complexity
Assistant Professor
Université Catholique de Louvain
2005
Physics and Math at primary school
Hetauda, Nepal
NEST
2004
guide in Science Museum
Padova, Italy
Organizer: INFN

Student advising

2024
N. Barbieri
University of Bologna
Physics (tesi magistrale with F. Durazzi)
2019
G. Izzi
University of Turin
Computer Science (tesi magistrale with A. Semeraro)
2016
H. Devillez
UCLouvain
Applied Maths (with L. Peel)
2016
M. Huet
UCLouvain
Elec. Eng. (with L. Peel)

Education

2020
24CFU
Univestità telematica Pegaso
Discipline antropo-psico-pedagogiche e in metodologie e tecnologie didattiche
14 Sept 2012
PhD in Physics
University of Zaragoza
supervisor: prof. Pierpaolo Bruscolini
Analysis and Development of Algorithms for the Characterization of Biopolymers and Application to Protein Sequencing and Protein Folding
15 Oct 2008
Master in Physics and Technology
University of Zaragoza
supervisor: prof. Pierpaolo Bruscolini
Coevolution of Strategy and Population Structure in the Prisoner Dilemma
10 Oct 2005
MSc in Physics
University of Padova
supervisor: prof. Enzo Orlandini
Beris Edwards Model Simulations for Liquid Crystals in Oscillatory Poiseuille Flux

Mainteined projects

AISA
Python module aimed at partitioning a network through Autoinformation maximization
CartoTB
Cartography of predicted tuberculosis in high burden settings

Preprints

Temporal and geographic analysis of the Hydroxychloroquine controversy in the French Twittosphere
arXiv:2304.14075
M. Faccin, E. Schultz and F. Gargiulo

Publications

Measuring dynamical systems on directed hypergraphs
Phys Rev E, 106 (034306), 2022
M. Faccin
Assessing the influence of French vaccine critics during the two first years of the COVID-19 pandemic
PLOS ONE, 17(8): e0271157
M. Faccin, F. Gargiulo, L. Atlani-Duault, J.K. Ward
Data-driven identification of communities with high levels of tuberculosis infection in the Democratic Republic of Congo.
Sci Rep 12, 3912 (2022)
M. Faccin, O. Rusumba, A. Ushindi, M. Riziki, T. Habiragi, F. Boutachkourt, E. André
State aggregations in Markov chains and block models of networks
Phys. Rev. Lett., 127, 078301 (2021)
M. Faccin, M.T. Schaub and j.-C. Delvenne
Figure selected for the journal cover
Complex Networks from Classical to Quantum
Communications Physics 2-53 (2019)
J. Biamonte, M. Faccin, M. De Domenico
Outbreak of multidrug-resistant tuberculosis in South Africa undetected by WHO-endorsed commercial tests: an observational study
The Lancet Infectious Diseases 2018
Makhado, Matabane, Faccin, Pinçon, Jouet, Boutachkourt, Goeminne, Gaudin, Maphalala, Beckert, Niemann, Delvenne, Delmée, Razwiedani, Nchabeleng, Supply, de Jong, André
Entrograms and coarse graining of dynamics on complex networks
Journal of Complex Networks
M. Faccin, M.T. Schaub, J-C. Delvenne
Chiral Quantum Walks
Phys. Rev. A 93, 042302
D. L. Lu, J. D. Biamonte, J. Li, H. Li, T. H. Johnson, V. Bergholm, M. Faccin, Z. Zimborás, R. Laflamme, J. Baugh, and S. Lloyd
Mapping the topography of a protein energy landscape
J. Am. Chem. Soc., 2015, 137 (46), pp 14610–14625
R. D. Hutton, J. Wilkinson, M. Faccin, E. M. Sivertsson, A. Pelizzola, A. R. Lowe, P. Bruscolini, L. S. Itzhaki
Community Detection in Quantum Complex Networks
Phys. Rev. X 4 (4 2014), p. 041012
M. Faccin, P. Migdał, T. H. Johnson, V. Bergholm, and J. D. Biamonte
Degree Distribution in Quantum Walks on Complex Networks
Phys. Rev. X 3 (4 2013), p. 041007
M. Faccin, T. Johnson, J. Biamonte, S. Kais, and P. Migdał
Quantum Transport Enhancement by Time-Reversal Symmetry Breaking
Sci. Rep. 3 (2013). Ed. by NPG, p. 2361
Z. Zimboras, M. Faccin, Z. Kadar, J. Whitfield, B. Lanyon, and J. Biamonte
MS/MS Spectra Interpretation as a Statistical-Mechanics Problem
Analytical Chemistry 85.10 (2013), pp. 4884–4892
M. Faccin and P. Bruscolini
Ground-state spin logic
Europhysics Letters 99.5 (2012), p. 57004
J. D. Whitfield, M. Faccin, and J. D. Biamonte
Analysis of the equilibrium and kinetics of the ankyrin repeat protein myotrophin
The Journal of Chemical Physics 134.7, 075102 (2011), p. 075102
M. Faccin, P. Bruscolini, and A. Pelizzola

Conferences (Oral Contributions)

7 March 2023
Dynamical systems as a mean for complex systems analysis
seminar at the University of Bologna
M. Faccin
9 Nov 2022
Data-driven mapping of tuberculosis incidence allows identifying communities with high circulation of tuberculosis in the Democratic Republic of Congo
The Union Conference 2022 -- Online
M. Faccin, C. Nsop Mulaj, E. Swana Kawana, T. Yav Ikum, E. Andé
9 Nov 2022
Identification of urban areas presenting high incidence of tuberculosis using satellite images allows increasing the yield of active case finding in Kigali, Rwanda.
The Union Conference 2022 -- Online
M. Faccin, P Uwizeye, F. Nsabimana, P. Migambi, E. André
17 Oct 2022
Use of compartmental models to detect high TB incidence rates in South-Kivu (DRC)
CCS 2022 @ Palma de Mallorca/Online
M. Faccin, E. André
Reach of vaccine-critical content on Twitter during the COVID-19 pandemic
French Regional Conf. on Complex Systems (FRCCS) @ Paris
M. Faccin, F. Gargiulo
30 May 2022
Outreach of vaccine-critic content on French-speaking Twitter
Complenet 2022 -- Online
M. Faccin, F. Gargiulo, J. Ward
2 Dec 2021
Autoinformation state aggregation
Complex Networks 2021 @ Madrid (Spain)
M. Faccin, M. T. Schaub, J-C. Delvenne
30 Nov 2021
Vaccine-critical discourse on French-speaking Twitter and its outreach
Complex Networks 2021 @ Madrid (Spain)
M. Faccin, F. Gargiulo, J. Ward
Best lightning talk award
19 Oct 2021
State aggregation for dynamical systems: An information-theoretic approach
Math Dept, Oxford University, (UK -- Online)
Network Seminar 2021
7-9 Dec 2020
Using predictive models and risk assessment tools to find unreported TB cases
Washingthon DC, USA (online)
Global Digital Health Forum 2020
20-24 Oct 2020
Data-driven TB active-case finding in South Kivu (DRC)
Paris, France (online)
The Union 2020
10-12 Dec 2019
Auto-information in non-Markovian diffusion systems
Lisbon, Portugal
Complex Networks 2019
22 Feb. 2019
Variable aggregation for dynamical systems on networks
Hasselt, Belgium
Benet 2019
23-28 Sept. 2018
A dynamical approach to block structure analysis
Thessaloniki, Greece
CCS 2018
11-15 Jun 2018
Dynamical Markov Modules
Paris, France
Netsci 2018
21-24 Mar 2017
Community detection in networks with non-Markovian dynamics
Dubrovnik, Croatia
CompleNet 2017
30 Nov-2 Dec 2016
Behind Communities: Dynamics Define Modules
Milan, Italy
ComplexNetworks 2016
19-22 Sep 2016
Beyond Communities: Dynamical Markov Modules
Amsterdam, Netherlands
CCS 2016
May 30-June 3 2016
Mesoscopic Structure And Diffusion Process Memory
Seoul, Korea
NetSci 2016
10-15 Jan 2015
Mesoscopic Structures and Diffusion Process Memory
Wrocław, Poland
NetSci-X 2016
2-6 Jun 2015
Structural controllability of EEG temporal causal networks
Zaragoza, Spain
NetSci 2015
22-26 Sep 2014
Quantum Approaches to Community Detection
Lucca, Italy
ECCS 2014
12-14 Mar 2014
Community detection on quantum systems
Bologna, Italy
CompleNet 2014
22-24 Jan 2014
Community Detection on Quantum Systems
Zaragoza, Spain
BIFI2014
24-26 May 2013
Degree distribution in quantum complex networks
Waterloo, Canada
IQC workshop on quantum computation and complex networks
6-8 Nov 2012
Ground state spin logic
Torino, Italy
Tensor Network States and Algebraic Geometry Workshop
2-4 Feb 2011
Equilibrium and kinetics of the ankyrin repeat protein Myotrophin through a simple statiscical mechanical model
Zaragoza, Spain
V BIFI National Conference
5-7 Feb 2009
Bayesian Characterization of Protein Tandem Mass Spectra
Zaragoza, Spain
IV BIFI National Conference
8-9 May 2008
Noise description in MSMS mass spectrometry, looking for a de novo sequencing algorithm
San Sebastian, Spain
VI Jornadas Aragonesas de Estabilidad y Plegamiento de Proteínas

Conferences (Poster Contributions)

1 Dec 2021
Directed hyper-graphs and dynamical systems
Complex Networks 2021 @ Madrid (Spain)
M. Faccin, F. Gargiulo
17-25 Sept 2020
State aggregation in non-Markovian systems by auto-information maximization
Rome, Italy
Netsci 2020
17-25 Sept 2020
The variability of network structures inferred from time series data
Rome, Italy
Netsci 2020
10-12 Dec 2019
The variability of network structures inferred from time series data
Lisbon, Portugal
Complex Networks 2019
1-3 July 2019
Variable aggregation on (broadcasting) networks
Trento, Italy
CCS/Italy 2019
23-25 Mar 2016
Memory and Mesoscopic Structures in Diffusion Processes
Dijon, France
Complenet 2016
7-10 Jul 2010
Folding Pathways Characterization for Ankyrin Repeat Protein Myotrophin
Zaragoza, Spain
IV Spanish Portuguese Biophysical Congress
2-6 Jun 2008
Statistical characterization of fragment ions in MSMS mass spectrometry
Sitges, Spain
XXI Sitges Conference on Statistical Mechanics: Statistical Mechanics of Molecular Biophysics

Computer skills

Coding:
Python, C, Matlab, Fortran
Shell:
Bash, iPython/Jupyter
Versioning:
GIT, Subversion, Mercurial
Plotting:
Gnuplot, Matplotlib, PGFPlots(LaTeX)
Typesetting:
LaTeX, LibreOffice, MSOffice, Markdown
Imaging:
Gimp (Raster), Tikx (LaTeX), Inkscape (Vectorial), Rawtherapee (RAW)
Web:
HTML5, CSS/SCSS, static site generators, Wordpress

Languages

Italian:
Mother tongue
English:
Fluent
Spanish:
Fluent
French:
Fair